Publications

Publications

Complete List in Google Scholar.

Riemersma K, Steiner C, Singapuri A,  Coffey LL. Chikungunya virus fidelity variants exhibit differential attenuation and population diversity in cell culture and adult mice. 2018. Journal of Virology. In press (link coming soon).

Keeffe JR, Van Rompay KKA, Olsen PC, Wang Q, Gazumyan A,Azzopardi SA, Schaefer-Babajew D, Lee YE, Stuart JB, Singapuri A, Watanabe J, Usachenko J, Ardeshir A,  Saeed M, Agudelo M, Eisenreich T,  Bournazos S, Oliveira TY, Rice CM,  Coffey LL, MacDonald MR,  Bjorkman PJ, Nussenzweig MC, Robbiani DF. 2018. A Combination of Two Human Monoclonal Antibodies Prevents Zika Virus Escape Mutations in Non-human Primates. Cell Reports . Link.

Dudley DM, Van Rompay KK, Coffey LL, Ardeshir A,  Keesler RI,  Bliss-Moreau E, Grigsby PL, Steinbach RJ, Hirsch AJ, MacAllister RP, Pecoraro HL, Colgin LM, Hodge T,  Streblow DN,  Tardif S, Patterson JL, Tamhankar M, Seferovic M, Aagaard KM, Sánchez-San Martín C, Chiu CY, Panganiban AT, Veazey RS, Wang X, Maness NJ, Gilbert MH, Bohm RP, Adams Waldorf KM, Gale M, Rajagopal L, Hotchkiss CE, Mohr EL, Capuano SV, Simmons HA, Mejia A, Friedrich TC, Golos TG, O’Connor DH. 2018. Miscarriage and Stillbirth Following Maternal Zika Virus Infection in Nonhuman Primates. Nature Medicine Link.

Coffey LL, Keesler RI, Pesavento PP, Woolard K, Singapuri A, Watanabe J, Cruzen C, Christe KL, Usachenko JU, Yee J, Heng VA, Bliss-Moreau E, Reader JR, von Morgenland W, Gibbons AM, Jackson K, Ardeshir A, Heimsath H, Permar SR, Senthamaraikannan P, Presicce P, Kallapur SG, Linnen JM, Gao K, Orr R, MacGill T, McClure M, McFarland R, Morrison JM, Van Rompay KKA. 2018. Intra-Amniotic Zika Virus Inoculation of Pregnant Rhesus Macaques Produces Fetal Neurologic Disease. Nature Communications. Link

Main BJ, Nicholson J, Winokur OC, Steiner C, Riemersma KK, Stuart J,  Takeshita R, Krasnec M, Barker CM, Coffey LL. 2018. Vector competence of Aedes aegypti, Culex tarsalis, and Culex quinquefasciatus from California for Zika virus. PLoS Neglected Tropical Diseases. Link

Steiner CD, Riemersma KK, Stuart JB, Singapuri A, Lothrop HD, Coffey LL 2018. Scented Sugar Baits Enhance Detection of St. Louis Encephalitis and West Nile Viruses in Mosquitoes in Suburban California.  Journal of Medical Entomology. Link.

Prow NA, Mah MG, Deerain JM, Warrilow D, Colmant AMG, O’Brien C, Harrison JJ, McLean BJ, Hewlett E, Piyasena TBH, Hall-Mendelin S, van den Hurk AF, Watterson D, Schulz BL, Webb CE, Johansen CA, Chow WK , Hobson-Peters J, Cazier C, Coffey LL, Faddy HM, Suhrbier A, Bielefeldt-Ohmann H, Hall RA. 2018. New genotypes of Liao ning virus (LNV) in Australia exhibit an insect-specific phenotype.  Journal of General Virology, 99(4):596-609. Link

Chiu CY, Coffey LL, Murkey J, Symmes K, Hsieh K, Muradyan A, Sample HA, Wilson MR, Naccache SN, Arevalo S, Somasekar S, Vespa P, Schiller G, Messenger S, Humphries R, Miller S , Klausner J. 2017. Fatal human case of mosquito-borne St. Louis encephalitis virus infection diagnosed by metagenomic sequencing, California, 2016. Emerging Infectious Diseases, 23(10):1694-1698. Link

Coffey LL, Pesavento PA, Keesler RI, Singapuri A, Watanabe J, Watanabe R, Yee J, Bliss-Moreau E, Cruzen C, Christe KL, Reader JR, von Morgenland W, Gibbons AM, Allen AM, Linnen J, Gao K, Delwart E, Simmons G, Stone M, Lanteri M, Bakkour S, Busch MP, Morrison J, Van Rompay KKA. 2017. Zika virus tissue and blood compartmentalization in acute infection of rhesus macaques. PLoS One. 12(1): e0171148. doi:10.1371/journal.pone.0171148. Link

Stone M, Lantern, MC, Bakkour S, Deng X, Galel SA, Linnen JM, Munoz-Jordan JL, Lanciotti RS, Rios M, Gallian P, Musso D, Levi, JE, Sabino EC, Coffey LL, Busch MP. 2017. Analytical Performance of Donor NAT Screening and Diagnostic Real-Time PCR Assays for Detection of Zika Virus RNA. Transfusion. (57): 734–747. Link.

White, GS, Symmes K, Sun P, Fang Y, Garcia S, Steiner C, Smith K, Reisen WK, Coffey LL. 2016. Reemergence of St. Louis Encephalitis Virus, California, 2015. Emerging Infectious Diseases 22(12):2815-2188. Link.

Ball, CL, Light, Y, Koh, C-Y; Wheeler, S, Coffey, LL; Meagher, R. 2016. Quenching of Unincorporated Amplification Signal Reporters (QUASR) in RT-LAMP Enables Bright, Single-Step, Closed-Tube, and Multiplexed Detection of RNA Viruses. Analytical Chemistry. DOI: 10.1021/acs.analchem.5b04054. Link.

Wheeler SS, Ball CS, Langevin SA Fang Y, Coffey LL, Meagher R. Surveillance for Western Equine Encephalitis, St. Louis Encephalitis, and West Nile Viruses using Reverse Transcription Loop-mediated Isothermal Amplification. 2016. PLoS One, 11(1): e0147962. doi:10.1371/journal.pone.0147962. Link.

Stapleford KA, Coffey LL, Lay S, Duong V, Isakov O, Blanc H, Borderia A, Beaucourt S, Haliloğlu T, Schmitt C, Bonne I, Tal NB, Shomron N, Failloux AB, Buchy P, Vignuzzi M. 2014. Emergence and Transmission of Arbovirus Evolutionary Intermediates with Epidemic Potential. Cell, Host & Microbe, 15:706-716. Link.

Coffey LL, Page BL, Greninger AL, Herring BL, Russell RC, Doggett SL, Haniotis J, Wang C, Deng X, Delwart EL. 2014. Enhanced Arbovirus Surveillance with Deep Sequencing: Identification of Novel Rhabdoviruses and Bunyaviruses in Australian Mosquitoes. Virology Journal, 448:146-158. Link. 

Naccache SN, Greninger AL, Lee D, Coffey LL, Phan T, Rein-Weston A, Aronsohn A, Hackett J Jr, Delwart EL, Chiu CY. 2013.The Perils of Pathogen Discovery: Origin of a Novel Parvovirus-Like Hybrid Genome Traced to Nucleic Acid Extraction Spin Columns. Journal of Virology. 87(22):11966-77. Link.

Berthet N, Paulous S, Coffey LL, Frenkiel MP Moltini I, Tran C, Matheus S, Ottone C, Ungeheuer M-N, Renaudat C, Caro V, Dussart P, Gessain A, Desprès P. 2012. Resequencing Microarray Method for Molecular Diagnosis of Human Arboviral Diseases. Journal of Clinical Virology, 56(3):238-43. Link.

Coffey LL, Beeharry Y, Borderia AV, Blanc H, Vignuzzi M. 2011. Arbovirus High Fidelity Variant Loses Fitness in Mosquitoes and Mice. Proceedings of the National Academy of Sciences, 108(38):16038-43. Link.

Beaucourt S, Borderia AV, Coffey LL, Gnadig NF, Sanz-Ramos M, Beeharry Y, Vignuzzi M. 2011. Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency. Journal of Visualized Experiments, Jun 16;(52) pii:2953. doi:10.3791/2953. Link.

Coffey LL, Vignuzzi M. 2011. Host Alternation of Chikungunya Virus Increases Fitness While Restricting Population Diversity and Adaptability to Novel Selective Pressures. Journal of Virology, 85(2):1025-35. Link.

Schneider BS, Soong L, Coffey LL, Stevenson HL, McGee CE, Higgs S. 2010. Aedes aegypti Saliva Alters Leukocyte Recruitment and Cytokine Signaling by Antigen-Presenting Cells during West Nile Virus Infection. PLOS One, July 22;5(7):e11704. Link.

Coffey LL, Vasilakis N, Brault AC, Powers AM, Tripet F, Weaver SC. 2008. Arbovirus Evolution in vivo is Constrained by Host Alternation. Proceedings of the National Academy of Sciences, 105(19):6970- 6975. Link.

Carrara AC, Coffey LL, Aguilar PV, Moncayo AC, Travassos da Rosa A, Nunes MRT, Tesh RB,Weaver SC. 2007. Venezuelan Equine Encephalitis Virus Infection of Cotton Rats. Emerging Infectious Diseases, 13(8):1158-1165. Link.

Ozden S, Huerre M, Riviere J-P, Coffey LL, Afonso PV, Mouly V, Monredon J, Roger J-C, Amrani M, Yvin J-L, Jaffar M-C, Frenkiel M-P, Sourisseau M, Schwartz O, Butler-Browne G, Desprès P, Gessain A, Ceccaldi P-E. 2007. Human Muscle Satellite Cells as Targets of Chikungunya Virus Infection. PLOS One, Jun 13;2(6):e527. Link.

Coffey LL, Crawford C, Miller R, Dee J, Freier J, Weaver SC. 2006. Serologic Evidence of Widespread Everglades Virus Infection of Dogs in Florida. Emerging Infectious Diseases, 12(12):1873-1879. Link.

Smith DR, Aguilar PV, Coffey LL, Gromowski G, Wang E, Weaver SC. 2006. Estimate of the Amount of Venezuelan Equine Encephalitis Virus Transmitted by Mosquitoes in vivo and the Effect of Transmission Mode on Pathogenesis. Emerging Infectious Diseases, 12(8):1190-1196. Link. 

Navarro JC, Medina G, Vasquez C, Coffey LL, Wang E, Suárez A , Biord H, Salas M, Weaver SC. 2005. Postepizootic Persistence of Venezuelan Equine Encephalitis Virus, Venezuela. Emerging Infectious Diseases, 11(12):1907-1915. Link.

Diallo M, Sall A, Moncayo A, Ba Y, Fernandez Z, Ortiz D, Coffey LL, Mathiot, C, Tesh, RB, Weaver SC. 2005. Potential Role of Sylvatic and Domestic African Mosquito Species in Dengue Emergence. American Journal of Tropical Medicine and Hygiene, 73(2):445-449. Link.

Coffey LL, Weaver SC. 2005. Susceptibility of Ochlerotatus taeniorhynchus and Culex nigripalpus for Everglades Virus. American Journal of Tropical Medicine and Hygiene, 73(1):11-16.

Wang E, Paessler S, Aguilar PV, Smith DR, Coffey LL, Kang W, Pfeffer M, Olson J, Blair PJ, Guevara C, Estrada-Franco J, Weaver SC. 2005. A Novel, Rapid Assay for Detection and Differentiation of Serotype-Specific Antibodies to Venezuelan Equine Encephalitis Complex Alphaviruses. American Journal of Tropical Medicine and Hygiene, 72(6):805-810.

Coffey LL, Carrara AS, Paessler S, Haynie ML, Bradley R, Tesh RB, Weaver SC. 2004. Experimental Everglades Virus Infection of Cotton Rats (Sigmodon hispidus). Emerging Infectious Diseases, 10(12):2182-2188.

Moncayo AC, Fernandez Z, Ortiz D, Diallo M, Sall A, Hartman S, Davis CT, Coffey L, Mathiot CC, Tesh RB, Weaver SC. 2004. Dengue Emergence and Adaptation to Peridomestic Mosquitoes. Emerging Infectious Diseases, 10(10):1790-1797.

Beasley DW, Holbrook MR, Travassos Da Rosa AP, Coffey L, Carrara AS, Phillippi-Falkenstein K, Bohm RP Jr, Ratterree MS, Lillibridge KM, Ludwig GV, Estrada-Franco J, Weaver SC, Tesh RB, Shope RE, Barrett AD. 2004. Use of a Recombinant Envelope Protein Subunit Antigen for Specific Serological Diagnosis of West Nile Virus Infection. Journal of Clinical Microbiology, 42(6):2759-65.

Aguilar PV, Greene IP, Coffey LL, Medina G, Moncayo AC, Anishchenko M, Ludwig GV, Turell MJ, O’Guinn ML, Lee J, Tesh RB, Watts DM, Russell KL, Hice C, Yanoviak S, Morrison AC, Klein TA, Dohm DJ, Guzman H, Travassos da Rosa AP, Guevara C, Kochel T, Olson J, Cabezas C, Weaver SC. 2004. Endemic Venezuelan Equine Encephalitis in Northern Peru. Emerging Infectious Diseases, 10(5):880-8.

Estrada-Franco JG, Navarro-Lopez R, Beasley DW, Coffey L, Carrara AS, Travassos da Rosa A, Clements T, Wang E, Ludwig G, Cortes AC, Ramirez PP, Tesh RB, Barrett AC, Weaver SC. 2003. West Nile Virus in Mexico: Evidence of Widespread Circulation since July 2002. Emerging Infectious Diseases, 9(12):1604-7.

Travassos da Rosa A, Mather T, Takeda T, Whitehouse C, Shope R, Popov V, Guzman H, Coffey L, Araujo T, Tesh RB. 2002. Two New Rhabdoviruses (Rhabdoviridae) Isolated from Birds during Surveillance for Arboviral Encephalitis, Northeastern United States. Emerging Infectious Diseases, 8(6):614-618.