Liu H, Plancarte M, Ball EE, Weiss CM, Gonzales-Viera O, Holcomb K , Min Ma Z, Allen AM , Reader JR, Duignan PJ, Halaska B, Khan Z, Kriti D, Dutta J, van Bakel H, Jackson K, Pesavento PA , Boyce WM, Coffey LL. Respiratory tract explant infection dynamics of influenza A virus in California sea lions, northern elephant seals, and rhesus macaques 2021. Journal of Virology. Link.
Yiu G, Thomasy SM, Casanova MI, Rusakevich A, Keesler RI, Watanabe J, Usachenko J, Singapuri A, Ball EE, Bliss-Moreau E, Guo W, Webster H, Singh T, Permar S, Ardeshir A, Coffey LL, Van Rompay KK. Evolution of ocular defects in infant macaques following in utero Zika virus infection. 2020. JCI Insight. Link.
Collette NM , Lao VHI, Weilhammer DR, Zingg B, Cohen SD, Hwang M, Coffey LL , Grady SL, Zemla AT, Borucki MK. Single amino acid mutations affect Zika virus replication in vitro and virulence in vivo. 2020 Virology. Link.
Riemersma KK, Coffey LL. Chikungunya Virus Populations Experience Diversity-Dependent Attenuation and Purifying Intra-Vector Selection in Californian Aedes aegypti Mosquitoes. 2019. Public Library of Science Neglected Tropical Diseases. Link.
Swei A, Couper LI, Coffey LL, Durrell K, Bennett S. Patterns, Drivers, and Challenges of Vector-Borne Disease Emergence. 2019. Vector-Borne and Zoonotic Diseases. Link.
Borucki MK, Collette NM, Coffey LL, Van Rompay KKA, Hwang MH, Thissen JB, Allen JE, Zamla AT. Multiscale Analysis for Patterns of Zika Virus Genotype Emergence, Spread, and Consequence. 2019. Public Library of Science One. Link.
Robbiani DF, Olsen PC, Costa F, Wang Q, Oliveira TY, Nery N, Aromolaran A, do Rosário MS, Sacramento GA, Cruz JS, Khouri R, Wunder EA, Mattos M, de Paula Freitas B, Sarno M, Archanjo G, Daltro D, Carvalho GBS, Pimentel K, de Siqueira IC, de Almeida JRM, Henriques DF, Lima JA, Vasconcelos PFC, Schaefer-Babajew D, Azzopardi SA, Bozzacco L, Gazumyan A, Belfort R, Alcântara AP, Carvalho G, Moreira L, Araujo K, Reis MG, Keesler RI, Coffey LL, Tisoncik-Go J, Gale M, Rajagopal L, Adams Waldorf KM, Dudley DM, Simmons HA, Mejia A, O’Connor DH, Steinbach RJ, Haese N, Smith J, Lewis A, Colgin L, Roberts V, Frias A, Kelleher M, Hirsch A, Streblow DN, Rice CM, MacDonald MR, de Almeida ARP, Van Rompay KKA, Ko AI, Nussenzweig MC. 2019. Risk of Zika Microcephaly Correlates with Features of Maternal Antibodies. Journal of Experimental Medicine. Link.
Maness NJ, Schouest B, Singapuri A, Dennis M, Gilbert MH, Bohm RP, Schiro F, Aye PP, Baker K, Van Rompay KKA, Lackner AA, Bonaldo MC, Blair RV, Permar SR, Coffey LL, Panganiban AT, Magnani D. 2019. Postnatal Zika Virus Infection of Nonhuman Primate Infants Born to Mothers Infected with Homologous Brazilian Zika Virus. Scientific Reports. Link.
Grubaugh ND, Gangavarapu K, Quick J, Matteson NL, Goes De Jesus J, Main BJ, Tan AL, Paul LM, Brackney DE, Grewal S , Gurfield N, Van Rompay KKA, Isern S, Michael SF, Coffey LL, Loman NJ, Andersen KG. 2019. An Amplicon-Based Sequencing Framework for Accurately Measuring Intrahost Virus Diversity Using PrimalSeq and iVar. Genome Biology. Link.